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  • AstroPay

    AstroPay

    AstroPay is a global digital wallet that provides users with a way to pay, send, and receive money. The app provides online payments, virtual and physical debit cards, peer-to-peer money transfers, and more. == History == AstroPay was founded in Uruguay in 2009 as a payment processing company. Over time, it expanded its services across Latin America, EMEA, and APAC. A significant milestone occurred in 2016, when AstroPay spun off dLocal, focusing on cross-border payments for emerging markets. dLocal became Uruguay's first unicorn and eventually went public through a successful IPO. In 2020, AstroPay spun off its payment processing services into a new entity, D24, to focus on mobile wallet for cross border. Between 2023 and 2024 the Company brought new leadership to guide its transition towards becoming a fully focused global digital multicurrency wallet where users save, send, and spend globally. This shift introduced enhanced features, including loyalty prepaid cards and multicurrency accounts. == Services == AstroPay offers three main products: AstroPay Wallet, AstroPay check-out, and AstroPay Platform. AstroPay Wallet is a digital wallet for consumers, where they have multicurrency accounts, prepaid card and marketplace. With AstroPay check-out, businesses can tap into AstroPay's wallet user base by accepting AstroPay as a payment method in their check-out options. Lastly, AstroPay Platform enables other businesses to use the AstroPay network to launch their own global wallet. == Brand endorsements, partnerships == AstroPay's marketing strategy has included the development of co-branded products with sports teams and other brand. The company sponsored Burnley Football Club during the 2018–19 Premier League season, renewing the partnership for the 2021–22 Premier League season when it became the club's official payment service partner. In August 2021, AstroPay entered into a partnership with the Wolverhampton Wanderers for the 2021-22 Premier League season, and the following year, became the team's shirt sponsor. Later, in September 2021, AstroPay expanded its partnership with Wolverhampton Wanderers, which included becoming the team's official payment partner and later, in 2023, co-launching a co-branded card. Other partnerships include Newcastle United in 2021 in the English Premier League. AstroPay made arrangements to ensure that branding and logo would be visible on the pitch-side LED advertising during Premier League matches. Furthermore, in June 2022, the company renewed it's partnership with Wolverhampton Wanderers for the 2022-23 Premier League season and launched its Wolves debit card in February 2023. Some other notable partnerships include: Universidad de Chile in 2024, Tottenham Hotspurs in 2023-25, and even a collaboration with Lionel Messi across all of Latin America. == Recent developments == AstroPay has refocused its strategy since 2023, pivoting from payment processing to concentrate on its global digital wallet. This move reflects a broader effort to redefine the company's market positioning by emphasizing global user-friendly financial services, while separating its identity from previous operations managed by dLocal and D24.

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  • Elastic net regularization

    Elastic net regularization

    In statistics and, in particular, in the fitting of linear or logistic regression models, the elastic net is a regularized regression method that linearly combines the L1 and L2 penalties of the lasso and ridge methods. Nevertheless, elastic net regularization is typically more accurate than both methods with regard to reconstruction. == Specification == The elastic net method overcomes the limitations of the LASSO (least absolute shrinkage and selection operator) method which uses a penalty function based on ‖ β ‖ 1 = ∑ j = 1 p | β j | . {\displaystyle \|\beta \|_{1}=\textstyle \sum _{j=1}^{p}|\beta _{j}|.} Use of this penalty function has several limitations. For example, in the "large p, small n" case (high-dimensional data with few examples), the LASSO selects at most n variables before it saturates. Also if there is a group of highly correlated variables, then the LASSO tends to select one variable from a group and ignore the others. To overcome these limitations, the elastic net adds a quadratic part ( ‖ β ‖ 2 {\displaystyle \|\beta \|^{2}} ) to the penalty, which when used alone is ridge regression (known also as Tikhonov regularization). The estimates from the elastic net method are defined by β ^ ≡ argmin β ( ‖ y − X β ‖ 2 + λ 2 ‖ β ‖ 2 + λ 1 ‖ β ‖ 1 ) . {\displaystyle {\hat {\beta }}\equiv {\underset {\beta }{\operatorname {argmin} }}(\|y-X\beta \|^{2}+\lambda _{2}\|\beta \|^{2}+\lambda _{1}\|\beta \|_{1}).} The quadratic penalty term makes the loss function strongly convex, and it therefore has a unique minimum. The elastic net method includes the LASSO and ridge regression: in other words, each of them is a special case where λ 1 = λ , λ 2 = 0 {\displaystyle \lambda _{1}=\lambda ,\lambda _{2}=0} or λ 1 = 0 , λ 2 = λ {\displaystyle \lambda _{1}=0,\lambda _{2}=\lambda } . Meanwhile, the naive version of elastic net method finds an estimator in a two-stage procedure : first for each fixed λ 2 {\displaystyle \lambda _{2}} it finds the ridge regression coefficients, and then does a LASSO type shrinkage. This kind of estimation incurs a double amount of shrinkage, which leads to increased bias and poor predictions. To improve the prediction performance, sometimes the coefficients of the naive version of elastic net is rescaled by multiplying the estimated coefficients by ( 1 + λ 2 ) {\displaystyle (1+\lambda _{2})} . Examples of where the elastic net method has been applied are: Support vector machine Metric learning Portfolio optimization Cancer prognosis == Reduction to support vector machine == It was proven in 2014 that the elastic net can be reduced to the linear support vector machine. A similar reduction was previously proven for the LASSO in 2014. The authors showed that for every instance of the elastic net, an artificial binary classification problem can be constructed such that the hyper-plane solution of a linear support vector machine (SVM) is identical to the solution β {\displaystyle \beta } (after re-scaling). The reduction immediately enables the use of highly optimized SVM solvers for elastic net problems. It also enables the use of GPU acceleration, which is often already used for large-scale SVM solvers. The reduction is a simple transformation of the original data and regularization constants X ∈ R n × p , y ∈ R n , λ 1 ≥ 0 , λ 2 ≥ 0 {\displaystyle X\in {\mathbb {R} }^{n\times p},y\in {\mathbb {R} }^{n},\lambda _{1}\geq 0,\lambda _{2}\geq 0} into new artificial data instances and a regularization constant that specify a binary classification problem and the SVM regularization constant X 2 ∈ R 2 p × n , y 2 ∈ { − 1 , 1 } 2 p , C ≥ 0. {\displaystyle X_{2}\in {\mathbb {R} }^{2p\times n},y_{2}\in \{-1,1\}^{2p},C\geq 0.} Here, y 2 {\displaystyle y_{2}} consists of binary labels − 1 , 1 {\displaystyle {-1,1}} . When 2 p > n {\displaystyle 2p>n} it is typically faster to solve the linear SVM in the primal, whereas otherwise the dual formulation is faster. Some authors have referred to the transformation as Support Vector Elastic Net (SVEN), and provided the following MATLAB pseudo-code: == Software == "Glmnet: Lasso and elastic-net regularized generalized linear models" is a software which is implemented as an R source package and as a MATLAB toolbox. This includes fast algorithms for estimation of generalized linear models with ℓ1 (the lasso), ℓ2 (ridge regression) and mixtures of the two penalties (the elastic net) using cyclical coordinate descent, computed along a regularization path. JMP Pro 11 includes elastic net regularization, using the Generalized Regression personality with Fit Model. "pensim: Simulation of high-dimensional data and parallelized repeated penalized regression" implements an alternate, parallelised "2D" tuning method of the ℓ parameters, a method claimed to result in improved prediction accuracy. scikit-learn includes linear regression and logistic regression with elastic net regularization. SVEN, a Matlab implementation of Support Vector Elastic Net. This solver reduces the Elastic Net problem to an instance of SVM binary classification and uses a Matlab SVM solver to find the solution. Because SVM is easily parallelizable, the code can be faster than Glmnet on modern hardware. SpaSM, a Matlab implementation of sparse regression, classification and principal component analysis, including elastic net regularized regression. Apache Spark provides support for Elastic Net Regression in its MLlib machine learning library. The method is available as a parameter of the more general LinearRegression class. SAS (software) The SAS procedure Glmselect and SAS Viya procedure Regselect support the use of elastic net regularization for model selection.

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  • U-matrix

    U-matrix

    The U-matrix (unified distance matrix) is a representation of a self-organizing map (SOM) where the Euclidean distance between the codebook vectors of neighboring neurons is depicted in a grayscale image. This image is used to visualize the data in a high-dimensional space using a 2D image. == Construction procedure == Once the SOM is trained using the input data, the final map is not expected to have any twists. If the map is twist-free, the distance between the codebook vectors of neighboring neurons gives an approximation of the distance between different parts of the underlying data. When such distances are depicted in a grayscale image, light colors depict closely spaced node codebook vectors and darker colors indicate more widely separated node codebook vectors. Thus, groups of light colors can be considered as clusters, and the dark parts as the boundaries between the clusters. This representation can help to visualize the clusters in the high-dimensional spaces, or to automatically recognize them using relatively simple image processing techniques.

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  • Error-driven learning

    Error-driven learning

    In reinforcement learning, error-driven learning is a method for adjusting a model's (intelligent agent's) parameters based on the difference between its output results and the ground truth. These models stand out as they depend on environmental feedback, rather than explicit labels or categories. They are based on the idea that language acquisition involves the minimization of the prediction error (MPSE). By leveraging these prediction errors, the models consistently refine expectations and decrease computational complexity. Typically, these algorithms are operated by the GeneRec algorithm. Error-driven learning has widespread applications in cognitive sciences and computer vision. These methods have also found successful application in natural language processing (NLP), including areas like part-of-speech tagging, parsing, named entity recognition (NER), machine translation (MT), speech recognition (SR), and dialogue systems. == Formal Definition == Error-driven learning models are ones that rely on the feedback of prediction errors to adjust the expectations or parameters of a model. The key components of error-driven learning include the following: A set S {\displaystyle S} of states representing the different situations that the learner can encounter. A set A {\displaystyle A} of actions that the learner can take in each state. A prediction function P ( s , a ) {\displaystyle P(s,a)} that gives the learner's current prediction of the outcome of taking action a {\displaystyle a} in state s {\displaystyle s} . An error function E ( o , p ) {\displaystyle E(o,p)} that compares the actual outcome o {\displaystyle o} with the prediction p {\displaystyle p} and produces an error value. An update rule U ( p , e ) {\displaystyle U(p,e)} that adjusts the prediction p {\displaystyle p} in light of the error e {\displaystyle e} . == Algorithms == Error-driven learning algorithms refer to a category of reinforcement learning algorithms that leverage the disparity between the real output and the expected output of a system to regulate the system's parameters. Typically applied in supervised learning, these algorithms are provided with a collection of input-output pairs to facilitate the process of generalization. The widely utilized error backpropagation learning algorithm is known as GeneRec, a generalized recirculation algorithm primarily employed for gene prediction in DNA sequences. Many other error-driven learning algorithms are derived from alternative versions of GeneRec. == Applications == === Cognitive science === Simpler error-driven learning models effectively capture complex human cognitive phenomena and anticipate elusive behaviors. They provide a flexible mechanism for modeling the brain's learning process, encompassing perception, attention, memory, and decision-making. By using errors as guiding signals, these algorithms adeptly adapt to changing environmental demands and objectives, capturing statistical regularities and structure. Furthermore, cognitive science has led to the creation of new error-driven learning algorithms that are both biologically acceptable and computationally efficient. These algorithms, including deep belief networks, spiking neural networks, and reservoir computing, follow the principles and constraints of the brain and nervous system. Their primary aim is to capture the emergent properties and dynamics of neural circuits and systems. === Computer vision === Computer vision is a complex task that involves understanding and interpreting visual data, such as images or videos. In the context of error-driven learning, the computer vision model learns from the mistakes it makes during the interpretation process. When an error is encountered, the model updates its internal parameters to avoid making the same mistake in the future. This repeated process of learning from errors helps improve the model's performance over time. For NLP to do well at computer vision, it employs deep learning techniques. This form of computer vision is sometimes called neural computer vision (NCV), since it makes use of neural networks. NCV therefore interprets visual data based on a statistical, trial and error approach and can deal with context and other subtleties of visual data. === Natural Language Processing === ==== Part-of-speech tagging ==== Part-of-speech (POS) tagging is a crucial component in Natural Language Processing (NLP). It helps resolve human language ambiguity at different analysis levels. In addition, its output (tagged data) can be used in various applications of NLP such as information extraction, information retrieval, question Answering, speech eecognition, text-to-speech conversion, partial parsing, and grammar correction. ==== Parsing ==== Parsing in NLP involves breaking down a text into smaller pieces (phrases) based on grammar rules. If a sentence cannot be parsed, it may contain grammatical errors. In the context of error-driven learning, the parser learns from the mistakes it makes during the parsing process. When an error is encountered, the parser updates its internal model to avoid making the same mistake in the future. This iterative process of learning from errors helps improve the parser's performance over time. In conclusion, error-driven learning plays a crucial role in improving the accuracy and efficiency of NLP parsers by allowing them to learn from their mistakes and adapt their internal models accordingly. ==== Named entity recognition (NER) ==== NER is the task of identifying and classifying entities (such as persons, locations, organizations, etc.) in a text. Error-driven learning can help the model learn from its false positives and false negatives and improve its recall and precision on (NER). In the context of error-driven learning, the significance of NER is quite profound. Traditional sequence labeling methods identify nested entities layer by layer. If an error occurs in the recognition of an inner entity, it can lead to incorrect identification of the outer entity, leading to a problem known as error propagation of nested entities. This is where the role of NER becomes crucial in error-driven learning. By accurately recognizing and classifying entities, it can help minimize these errors and improve the overall accuracy of the learning process. Furthermore, deep learning-based NER methods have shown to be more accurate as they are capable of assembling words, enabling them to understand the semantic and syntactic relationship between various words better. ==== Machine translation ==== Machine translation is a complex task that involves converting text from one language to another. In the context of error-driven learning, the machine translation model learns from the mistakes it makes during the translation process. When an error is encountered, the model updates its internal parameters to avoid making the same mistake in the future. This iterative process of learning from errors helps improve the model's performance over time. ==== Speech recognition ==== Speech recognition is a complex task that involves converting spoken language into written text. In the context of error-driven learning, the speech recognition model learns from the mistakes it makes during the recognition process. When an error is encountered, the model updates its internal parameters to avoid making the same mistake in the future. This iterative process of learning from errors helps improve the model's performance over time. ==== Dialogue systems ==== Dialogue systems are a popular NLP task as they have promising real-life applications. They are also complicated tasks since many NLP tasks deserving study are involved. In the context of error-driven learning, the dialogue system learns from the mistakes it makes during the dialogue process. When an error is encountered, the model updates its internal parameters to avoid making the same mistake in the future. This iterative process of learning from errors helps improve the model's performance over time. == Advantages == Error-driven learning has several advantages over other types of machine learning algorithms: They can learn from feedback and correct their mistakes, which makes them adaptive and robust to noise and changes in the data. They can handle large and high-dimensional data sets, as they do not require explicit feature engineering or prior knowledge of the data distribution. They can achieve high accuracy and performance, as they can learn complex and nonlinear relationships between the input and the output. == Limitations == Although error driven learning has its advantages, their algorithms also have the following limitations: They can suffer from overfitting, which means that they memorize the training data and fail to generalize to new and unseen data. This can be mitigated by using regularization techniques, such as adding a penalty term to the loss function, or reducing the complexity of the model. They can be sensitive to the choice of

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  • Eigenmoments

    Eigenmoments

    EigenMoments is a set of orthogonal, noise robust, invariant to rotation, scaling and translation and distribution sensitive moments. Their application can be found in signal processing and computer vision as descriptors of the signal or image. The descriptors can later be used for classification purposes. It is obtained by performing orthogonalization, via eigen analysis on geometric moments. == Framework summary == EigenMoments are computed by performing eigen analysis on the moment space of an image by maximizing signal-to-noise ratio in the feature space in form of Rayleigh quotient. This approach has several benefits in Image processing applications: Dependency of moments in the moment space on the distribution of the images being transformed, ensures decorrelation of the final feature space after eigen analysis on the moment space. The ability of EigenMoments to take into account distribution of the image makes it more versatile and adaptable for different genres. Generated moment kernels are orthogonal and therefore analysis on the moment space becomes easier. Transformation with orthogonal moment kernels into moment space is analogous to projection of the image onto a number of orthogonal axes. Nosiy components can be removed. This makes EigenMoments robust for classification applications. Optimal information compaction can be obtained and therefore a few number of moments are needed to characterize the images. == Problem formulation == Assume that a signal vector s ∈ R n {\displaystyle s\in {\mathcal {R}}^{n}} is taken from a certain distribution having correlation C ∈ R n × n {\displaystyle C\in {\mathcal {R}}^{n\times n}} , i.e. C = E [ s s T ] {\displaystyle C=E[ss^{T}]} where E[.] denotes expected value. Dimension of signal space, n, is often too large to be useful for practical application such as pattern classification, we need to transform the signal space into a space with lower dimensionality. This is performed by a two-step linear transformation: q = W T X T s , {\displaystyle q=W^{T}X^{T}s,} where q = [ q 1 , . . . , q n ] T ∈ R k {\displaystyle q=[q_{1},...,q_{n}]^{T}\in {\mathcal {R}}^{k}} is the transformed signal, X = [ x 1 , . . . , x n ] T ∈ R n × m {\displaystyle X=[x_{1},...,x_{n}]^{T}\in {\mathcal {R}}^{n\times m}} a fixed transformation matrix which transforms the signal into the moment space, and W = [ w 1 , . . . , w n ] T ∈ R m × k {\displaystyle W=[w_{1},...,w_{n}]^{T}\in {\mathcal {R}}^{m\times k}} the transformation matrix which we are going to determine by maximizing the SNR of the feature space resided by q {\displaystyle q} . For the case of Geometric Moments, X would be the monomials. If m = k = n {\displaystyle m=k=n} , a full rank transformation would result, however usually we have m ≤ n {\displaystyle m\leq n} and k ≤ m {\displaystyle k\leq m} . This is specially the case when n {\displaystyle n} is of high dimensions. Finding W {\displaystyle W} that maximizes the SNR of the feature space: S N R t r a n s f o r m = w T X T C X w w T X T N X w , {\displaystyle SNR_{transform}={\frac {w^{T}X^{T}CXw}{w^{T}X^{T}NXw}},} where N is the correlation matrix of the noise signal. The problem can thus be formulated as w 1 , . . . , w k = a r g m a x w w T X T C X w w T X T N X w {\displaystyle {w_{1},...,w_{k}}=argmax_{w}{\frac {w^{T}X^{T}CXw}{w^{T}X^{T}NXw}}} subject to constraints: w i T X T N X w j = δ i j , {\displaystyle w_{i}^{T}X^{T}NXw_{j}=\delta _{ij},} where δ i j {\displaystyle \delta _{ij}} is the Kronecker delta. It can be observed that this maximization is Rayleigh quotient by letting A = X T C X {\displaystyle A=X^{T}CX} and B = X T N X {\displaystyle B=X^{T}NX} and therefore can be written as: w 1 , . . . , w k = a r g m a x x w T A w w T B w {\displaystyle {w_{1},...,w_{k}}={\underset {x}{\operatorname {arg\,max} }}{\frac {w^{T}Aw}{w^{T}Bw}}} , w i T B w j = δ i j {\displaystyle w_{i}^{T}Bw_{j}=\delta _{ij}} === Rayleigh quotient === Optimization of Rayleigh quotient has the form: max w R ( w ) = max w w T A w w T B w {\displaystyle \max _{w}R(w)=\max _{w}{\frac {w^{T}Aw}{w^{T}Bw}}} and A {\displaystyle A} and B {\displaystyle B} , both are symmetric and B {\displaystyle B} is positive definite and therefore invertible. Scaling w {\displaystyle w} does not change the value of the object function and hence and additional scalar constraint w T B w = 1 {\displaystyle w^{T}Bw=1} can be imposed on w {\displaystyle w} and no solution would be lost when the objective function is optimized. This constraint optimization problem can be solved using Lagrangian multiplier: max w w T A w {\displaystyle \max _{w}{w^{T}Aw}} subject to w T B w = 1 {\displaystyle {w^{T}Bw}=1} max w L ( w ) = max w ( w T A w − λ w T B w ) {\displaystyle \max _{w}{\mathcal {L}}(w)=\max _{w}(w{T}Aw-\lambda w^{T}Bw)} equating first derivative to zero and we will have: A w = λ B w {\displaystyle Aw=\lambda Bw} which is an instance of Generalized Eigenvalue Problem (GEP). The GEP has the form: A w = λ B w {\displaystyle Aw=\lambda Bw} for any pair ( w , λ ) {\displaystyle (w,\lambda )} that is a solution to above equation, w {\displaystyle w} is called a generalized eigenvector and λ {\displaystyle \lambda } is called a generalized eigenvalue. Finding w {\displaystyle w} and λ {\displaystyle \lambda } that satisfies this equations would produce the result which optimizes Rayleigh quotient. One way of maximizing Rayleigh quotient is through solving the Generalized Eigen Problem. Dimension reduction can be performed by simply choosing the first components w i {\displaystyle w_{i}} , i = 1 , . . . , k {\displaystyle i=1,...,k} , with the highest values for R ( w ) {\displaystyle R(w)} out of the m {\displaystyle m} components, and discard the rest. Interpretation of this transformation is rotating and scaling the moment space, transforming it into a feature space with maximized SNR and therefore, the first k {\displaystyle k} components are the components with highest k {\displaystyle k} SNR values. The other method to look at this solution is to use the concept of simultaneous diagonalization instead of Generalized Eigen Problem. === Simultaneous diagonalization === Let A = X T C X {\displaystyle A=X^{T}CX} and B = X T N X {\displaystyle B=X^{T}NX} as mentioned earlier. We can write W {\displaystyle W} as two separate transformation matrices: W = W 1 W 2 . {\displaystyle W=W_{1}W_{2}.} W 1 {\displaystyle W_{1}} can be found by first diagonalize B: P T B P = D B {\displaystyle P^{T}BP=D_{B}} . Where D B {\displaystyle D_{B}} is a diagonal matrix sorted in increasing order. Since B {\displaystyle B} is positive definite, thus D B > 0 {\displaystyle D_{B}>0} . We can discard those eigenvalues that large and retain those close to 0, since this means the energy of the noise is close to 0 in this space, at this stage it is also possible to discard those eigenvectors that have large eigenvalues. Let P ^ {\displaystyle {\hat {P}}} be the first k {\displaystyle k} columns of P {\displaystyle P} , now P T ^ B P ^ = D B ^ {\displaystyle {\hat {P^{T}}}B{\hat {P}}={\hat {D_{B}}}} where D B ^ {\displaystyle {\hat {D_{B}}}} is the k × k {\displaystyle k\times k} principal submatrix of D B {\displaystyle D_{B}} . Let W 1 = P ^ D B ^ − 1 / 2 {\displaystyle W_{1}={\hat {P}}{\hat {D_{B}}}^{-1/2}} and hence: W 1 T B W 1 = ( P ^ D B ^ − 1 / 2 ) T B ( P ^ D B ^ − 1 / 2 ) = I {\displaystyle W_{1}^{T}BW_{1}=({\hat {P}}{\hat {D_{B}}}^{-1/2})^{T}B({\hat {P}}{\hat {D_{B}}}^{-1/2})=I} . W 1 {\displaystyle W_{1}} whiten B {\displaystyle B} and reduces the dimensionality from m {\displaystyle m} to k {\displaystyle k} . The transformed space resided by q ′ = W 1 T X T s {\displaystyle q'=W_{1}^{T}X^{T}s} is called the noise space. Then, we diagonalize W 1 T A W 1 {\displaystyle W_{1}^{T}AW_{1}} : W 2 T W 1 T A W 1 W 2 = D A {\displaystyle W_{2}^{T}W_{1}^{T}AW_{1}W_{2}=D_{A}} , where W 2 T W 2 = I {\displaystyle W_{2}^{T}W_{2}=I} . D A {\displaystyle D_{A}} is the matrix with eigenvalues of W 1 T A W 1 {\displaystyle W_{1}^{T}AW_{1}} on its diagonal. We may retain all the eigenvalues and their corresponding eigenvectors since most of the noise are already discarded in previous step. Finally the transformation is given by: W = W 1 W 2 {\displaystyle W=W_{1}W_{2}} where W {\displaystyle W} diagonalizes both the numerator and denominator of the SNR, W T A W = D A {\displaystyle W^{T}AW=D_{A}} , W T B W = I {\displaystyle W^{T}BW=I} and the transformation of signal s {\displaystyle s} is defined as q = W T X T s = W 2 T W 1 T X T s {\displaystyle q=W^{T}X^{T}s=W_{2}^{T}W_{1}^{T}X^{T}s} . === Information loss === To find the information loss when we discard some of the eigenvalues and eigenvectors we can perform following analysis: η = 1 − t r a c e ( W 1 T A W 1 ) t r a c e ( D B − 1 / 2 P T A P D B − 1 / 2 ) = 1 − t r a c e ( D B ^ − 1 / 2 P ^ T A P ^ D B ^ − 1 / 2 ) t r a c e ( D B − 1 / 2 P T A P D B − 1 / 2 ) {\displaystyle {\begin{array}{lll}\eta &=&

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  • Deterministic blockmodeling

    Deterministic blockmodeling

    Deterministic blockmodeling is an approach in blockmodeling that does not assume a probabilistic model, and instead relies on the exact or approximate algorithms, which are used to find blockmodel(s). This approach typically minimizes some inconsistency that can occur with the ideal block structure. Such analysis is focused on clustering (grouping) of the network (or adjacency matrix) that is obtained with minimizing an objective function, which measures discrepancy from the ideal block structure. However, some indirect approaches (or methods between direct and indirect approaches, such as CONCOR) do not explicitly minimize inconsistencies or optimize some criterion function. This approach was popularized in the 1970s, due to the presence of two computer packages (CONCOR and STRUCTURE) that were used to "find a permutation of the rows and columns in the adjacency matrix leading to an approximate block structure". The opposite approach to deterministic blockmodeling is a stochastic blockmodeling approach.

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  • Dendrogram

    Dendrogram

    A dendrogram is a diagram representing a tree graph. This diagrammatic representation is frequently used in different contexts: in hierarchical clustering, it illustrates the arrangement of the clusters produced by the corresponding analyses. in computational biology, it shows the clustering of genes or samples, sometimes in the margins of heatmaps. in phylogenetics, it displays the evolutionary relationships among various biological taxa. In this case, the dendrogram is also called a phylogenetic tree. The name dendrogram derives from the two ancient greek words δένδρον (déndron), meaning "tree", and γράμμα (grámma), meaning "drawing, mathematical figure". == Clustering example == For a clustering example, suppose that five taxa ( a {\displaystyle a} to e {\displaystyle e} ) have been clustered by UPGMA based on a matrix of genetic distances. The hierarchical clustering dendrogram would show a column of five nodes representing the initial data (here individual taxa), and the remaining nodes represent the clusters to which the data belong, with the arrows representing the distance (dissimilarity). The distance between merged clusters is monotone, increasing with the level of the merger: the height of each node in the plot is proportional to the value of the intergroup dissimilarity between its two daughters (the nodes on the right representing individual observations all plotted at zero height).

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  • Cross-entropy

    Cross-entropy

    In information theory, the cross-entropy between two probability distributions p {\displaystyle p} and q {\displaystyle q} , over the same underlying set of events, measures the average number of bits needed to identify an event drawn from the set when the coding scheme used for the set is optimized for an estimated probability distribution q {\displaystyle q} , rather than the true distribution p {\displaystyle p} . == Definition == The cross-entropy of the distribution q {\displaystyle q} relative to a distribution p {\displaystyle p} over a given set is defined as follows: H ( p , q ) = − E p ⁡ [ log ⁡ q ] , {\displaystyle H(p,q)=-\operatorname {E} _{p}[\log q],} where E p ⁡ [ ⋅ ] {\displaystyle \operatorname {E} _{p}[\cdot ]} is the expected value operator with respect to the distribution p {\displaystyle p} . The definition may be formulated using the Kullback–Leibler divergence D K L ( p ∥ q ) {\displaystyle D_{\mathrm {KL} }(p\parallel q)} , divergence of p {\displaystyle p} from q {\displaystyle q} (also known as the relative entropy of p {\displaystyle p} with respect to q {\displaystyle q} ). H ( p , q ) = H ( p ) + D K L ( p ∥ q ) , {\displaystyle H(p,q)=H(p)+D_{\mathrm {KL} }(p\parallel q),} where H ( p ) {\displaystyle H(p)} is the entropy of p {\displaystyle p} . For discrete probability distributions p {\displaystyle p} and q {\displaystyle q} with the same support X {\displaystyle {\mathcal {X}}} , this means The situation for continuous distributions is analogous. We have to assume that p {\displaystyle p} and q {\displaystyle q} are absolutely continuous with respect to some reference measure r {\displaystyle r} (usually r {\displaystyle r} is a Lebesgue measure on a Borel σ-algebra). Let P {\displaystyle P} and Q {\displaystyle Q} be probability density functions of p {\displaystyle p} and q {\displaystyle q} with respect to r {\displaystyle r} . Then − ∫ X P ( x ) log ⁡ Q ( x ) d x = E p ⁡ [ − log ⁡ Q ] , {\displaystyle -\int _{\mathcal {X}}P(x)\,\log Q(x)\,\mathrm {d} x=\operatorname {E} _{p}[-\log Q],} and therefore NB: The notation H ( p , q ) {\displaystyle H(p,q)} is also used for a different concept, the joint entropy of p {\displaystyle p} and q {\displaystyle q} . == Motivation == In information theory, the Kraft–McMillan theorem establishes that any directly decodable coding scheme for coding a message to identify one value x i {\displaystyle x_{i}} out of a set of possibilities { x 1 , … , x n } {\displaystyle \{x_{1},\ldots ,x_{n}\}} can be seen as representing an implicit probability distribution q ( x i ) = ( 1 2 ) ℓ i {\displaystyle q(x_{i})=\left({\frac {1}{2}}\right)^{\ell _{i}}} over { x 1 , … , x n } {\displaystyle \{x_{1},\ldots ,x_{n}\}} , where ℓ i {\displaystyle \ell _{i}} is the length of the code for x i {\displaystyle x_{i}} in bits. Therefore, cross-entropy can be interpreted as the expected message-length per datum when a wrong distribution q {\displaystyle q} is assumed while the data actually follows a distribution p {\displaystyle p} . That is why the expectation is taken over the true probability distribution p {\displaystyle p} and not q . {\displaystyle q.} Indeed the expected message-length under the true distribution p {\displaystyle p} is E p ⁡ [ ℓ ] = − E p ⁡ [ ln ⁡ q ( x ) ln ⁡ ( 2 ) ] = − E p ⁡ [ log 2 ⁡ q ( x ) ] = − ∑ x i p ( x i ) log 2 ⁡ q ( x i ) = − ∑ x p ( x ) log 2 ⁡ q ( x ) = H ( p , q ) . {\displaystyle {\begin{aligned}\operatorname {E} _{p}[\ell ]&=-\operatorname {E} _{p}\left[{\frac {\ln {q(x)}}{\ln(2)}}\right]\\[1ex]&=-\operatorname {E} _{p}\left[\log _{2}{q(x)}\right]\\[1ex]&=-\sum _{x_{i}}p(x_{i})\,\log _{2}q(x_{i})\\[1ex]&=-\sum _{x}p(x)\,\log _{2}q(x)=H(p,q).\end{aligned}}} == Estimation == There are many situations where cross-entropy needs to be measured but the distribution of p {\displaystyle p} is unknown. An example is language modeling, where a model is created based on a training set T {\displaystyle T} , and then its cross-entropy is measured on a test set to assess how accurate the model is in predicting the test data. In this example, p {\displaystyle p} is the true distribution of words in any corpus, and q {\displaystyle q} is the distribution of words as predicted by the model. Since the true distribution is unknown, cross-entropy cannot be directly calculated. In these cases, an estimate of cross-entropy is calculated using the following formula: H ( T , q ) = − ∑ i = 1 N 1 N log 2 ⁡ q ( x i ) {\displaystyle H(T,q)=-\sum _{i=1}^{N}{\frac {1}{N}}\log _{2}q(x_{i})} where N {\displaystyle N} is the size of the test set, and q ( x ) {\displaystyle q(x)} is the probability of event x {\displaystyle x} estimated from the training set. In other words, q ( x i ) {\displaystyle q(x_{i})} is the probability estimate of the model that the i-th word of the text is x i {\displaystyle x_{i}} . The sum is averaged over the N {\displaystyle N} words of the test. This is a Monte Carlo estimate of the true cross-entropy, where the test set is treated as samples from p ( x ) {\displaystyle p(x)} . == Relation to maximum likelihood == The cross entropy arises in classification problems when introducing a logarithm in the guise of the log-likelihood function. This section concerns the estimation of the probabilities of different discrete outcomes. To this end, denote a parametrized family of distributions by q θ {\displaystyle q_{\theta }} , with θ {\displaystyle \theta } subject to the optimization effort. Consider a given finite sequence of N {\displaystyle N} values x i {\displaystyle x_{i}} from a training set, obtained from conditionally independent sampling. The likelihood assigned to any considered parameter θ {\displaystyle \theta } of the model is then given by the product over all probabilities q θ ( X = x i ) {\displaystyle q_{\theta }(X=x_{i})} . Repeated occurrences are possible, leading to equal factors in the product. If the count of occurrences of the value equal to x {\displaystyle x} is denoted by # x {\displaystyle \#x} , then the frequency of that value equals # x / N {\displaystyle \#x/N} . If p ( X = x ) {\displaystyle p(X=x)} is the underlying probability distribution, for large N {\displaystyle N} we expect p ( X = x ) ≈ # x / N {\displaystyle p(X=x)\approx \#x/N} , by the law of large numbers. Writing our likelihood function as the product of observations from the distribution q θ {\displaystyle q_{\theta }} : L ( θ ; x ) = ∏ i q θ ( X = x i ) = ∏ x q θ ( X = x ) # x ≈ ∏ x q θ ( X = x ) N ⋅ p ( X = x ) = exp ⁡ log ⁡ [ ∏ x q θ ( X = x ) N ⋅ p ( X = x ) ] = exp ⁡ ( ∑ x N ⋅ p ( X = x ) log ⁡ q θ ( X = x ) ) , {\displaystyle {\begin{aligned}{\mathcal {L}}(\theta ;{\mathbf {x} })&=\prod _{i}q_{\theta }(X=x_{i})=\prod _{x}q_{\theta }(X=x)^{\#x}\\&\approx \prod _{x}q_{\theta }(X=x)^{N\cdot p(X=x)}=\exp \log \left[\prod _{x}q_{\theta }(X=x)^{N\cdot p(X=x)}\right]\\&=\exp \left(\sum _{x}N\cdot p(X=x)\log q_{\theta }(X=x)^{}\right),\end{aligned}}} where we have used the calculation rules for the logarithm in the final line. Notice how the exponent contains a − H ( p , q θ ) {\displaystyle -H(p,q_{\theta })} term. Taking the logarithm of both sides gives: log ⁡ L ( θ ; x ) = − N ⋅ H ( p , q θ ) . {\displaystyle \log {\mathcal {L}}(\theta ;{\mathbf {x} })=-N\cdot H(p,q_{\theta }).} Since the logarithm is a monotonically increasing function, the maximizing value of θ {\displaystyle \theta } is unaffected by this final step. Similarly, the maximizing value of θ {\displaystyle \theta } is unaffected by the factor of N {\displaystyle N} . So we observe that the likelihood maximization amounts to minimization of the cross-entropy. == Cross-entropy minimization == Cross-entropy minimization is frequently used in optimization and rare-event probability estimation. When comparing a distribution q {\displaystyle q} against a fixed reference distribution p {\displaystyle p} , cross-entropy and KL divergence are identical up to an additive constant (since p {\displaystyle p} is fixed): According to the Gibbs' inequality, both take on their minimal values when p = q {\displaystyle p=q} , which is 0 {\displaystyle 0} for KL divergence, and H ( p ) {\displaystyle \mathrm {H} (p)} for cross-entropy. In the engineering literature, the principle of minimizing KL divergence (Kullback's "Principle of Minimum Discrimination Information") is often called the Principle of Minimum Cross-Entropy (MCE), or Minxent. However, as discussed in the article Kullback–Leibler divergence, sometimes the distribution q {\displaystyle q} is the fixed prior reference distribution, and the distribution p {\displaystyle p} is optimized to be as close to q {\displaystyle q} as possible, subject to some constraint. In this case the two minimizations are not equivalent. This has led to some ambiguity in the literature, with some authors attempting to resolve the inconsistency by restating cross-entropy to be D K L ( p ∥ q ) {\displaystyle D_{\mathrm {KL} }(p\parallel q)} , rather than H (

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  • Rule-based machine translation

    Rule-based machine translation

    Rule-based machine translation (RBMT) is a classical approach of machine translation systems based on linguistic information about source and target languages. Such information is retrieved from (unilingual, bilingual or multilingual) dictionaries and grammars covering the main semantic, morphological, and syntactic regularities of each language. Having input sentences, an RBMT system generates output sentences on the basis of analysis of both the source and the target languages involved. RBMT has been progressively superseded by more efficient methods, particularly neural machine translation. == History == The first RBMT systems were developed in the early 1970s. The most important steps of this evolution were the emergence of the following RBMT systems: Systran Japanese MT systems Today, other common RBMT systems include: Apertium GramTrans == Types of RBMT == There are three different types of rule-based machine translation systems: Direct Systems (Dictionary Based Machine Translation) map input to output with basic rules. Transfer RBMT Systems (Transfer Based Machine Translation) employ morphological and syntactical analysis. Interlingual RBMT Systems (Interlingua) use an abstract meaning. RBMT systems can also be characterized as the systems opposite to Example-based Systems of Machine Translation (Example Based Machine Translation), whereas Hybrid Machine Translations Systems make use of many principles derived from RBMT. == Basic principles == The main approach of RBMT systems is based on linking the structure of the given input sentence with the structure of the demanded output sentence, necessarily preserving their unique meaning. The following example can illustrate the general frame of RBMT: A girl eats an apple. Source Language = English; Demanded Target Language = German Minimally, to get a German translation of this English sentence one needs: A dictionary that will map each English word to an appropriate German word. Rules representing regular English sentence structure. Rules representing regular German sentence structure. And finally, we need rules according to which one can relate these two structures together. Accordingly, we can state the following stages of translation: 1st: getting basic part-of-speech information of each source word: a = indef.article; girl = noun; eats = verb; an = indef.article; apple = noun 2nd: getting syntactic information about the verb "to eat": NP-eat-NP; here: eat – Present Simple, 3rd Person Singular, Active Voice 3rd: parsing the source sentence: (NP an apple) = the object of eat Often only partial parsing is sufficient to get to the syntactic structure of the source sentence and to map it onto the structure of the target sentence. 4th: translate English words into German a (category = indef.article) => ein (category = indef.article) girl (category = noun) => Mädchen (category = noun) eat (category = verb) => essen (category = verb) an (category = indef. article) => ein (category = indef.article) apple (category = noun) => Apfel (category = noun) 5th: Mapping dictionary entries into appropriate inflected forms (final generation): A girl eats an apple. => Ein Mädchen isst einen Apfel. == Ontologies == An ontology is a formal representation of knowledge that includes the concepts (such as objects, processes etc.) in a domain and some relations between them. If the stored information is of linguistic nature, one can speak of a lexicon. In NLP, ontologies can be used as a source of knowledge for machine translation systems. With access to a large knowledge base, rule-based systems can be enabled to resolve many (especially lexical) ambiguities on their own. In the following classic examples, as humans, we are able to interpret the prepositional phrase according to the context because we use our world knowledge, stored in our lexicons:I saw a man/star/molecule with a microscope/telescope/binoculars.Since the syntax does not change, a traditional rule-based machine translation system may not be able to differentiate between the meanings. With a large enough ontology as a source of knowledge however, the possible interpretations of ambiguous words in a specific context can be reduced. === Building ontologies === The ontology generated for the PANGLOSS knowledge-based machine translation system in 1993 may serve as an example of how an ontology for NLP purposes can be compiled: A large-scale ontology is necessary to help parsing in the active modules of the machine translation system. In the PANGLOSS example, about 50,000 nodes were intended to be subsumed under the smaller, manually-built upper (abstract) region of the ontology. Because of its size, it had to be created automatically. The goal was to merge the two resources LDOCE online and WordNet to combine the benefits of both: concise definitions from Longman, and semantic relations allowing for semi-automatic taxonomization to the ontology from WordNet. A definition match algorithm was created to automatically merge the correct meanings of ambiguous words between the two online resources, based on the words that the definitions of those meanings have in common in LDOCE and WordNet. Using a similarity matrix, the algorithm delivered matches between meanings including a confidence factor. This algorithm alone, however, did not match all meanings correctly on its own. A second hierarchy match algorithm was therefore created which uses the taxonomic hierarchies found in WordNet (deep hierarchies) and partially in LDOCE (flat hierarchies). This works by first matching unambiguous meanings, then limiting the search space to only the respective ancestors and descendants of those matched meanings. Thus, the algorithm matched locally unambiguous meanings (for instance, while the word seal as such is ambiguous, there is only one meaning of seal in the animal subhierarchy). Both algorithms complemented each other and helped constructing a large-scale ontology for the machine translation system. The WordNet hierarchies, coupled with the matching definitions of LDOCE, were subordinated to the ontology's upper region. As a result, the PANGLOSS MT system was able to make use of this knowledge base, mainly in its generation element. == Components == The RBMT system contains: a SL morphological analyser - analyses a source language word and provides the morphological information; a SL parser - is a syntax analyser which analyses source language sentences; a translator - used to translate a source language word into the target language; a TL morphological generator - works as a generator of appropriate target language words for the given grammatica information; a TL parser - works as a composer of suitable target language sentences; Several dictionaries - more specifically a minimum of three dictionaries: a SL dictionary - needed by the source language morphological analyser for morphological analysis, a bilingual dictionary - used by the translator to translate source language words into target language words, a TL dictionary - needed by the target language morphological generator to generate target language words. The RBMT system makes use of the following: a Source Grammar for the input language which builds syntactic constructions from input sentences; a Source Lexicon which captures all of the allowable vocabulary in the domain; Source Mapping Rules which indicate how syntactic heads and grammatical functions in the source language are mapped onto domain concepts and semantic roles in the interlingua; a Domain Model/Ontology which defines the classes of domain concepts and restricts the fillers of semantic roles for each class; Target Mapping Rules which indicate how domain concepts and semantic roles in the interlingua are mapped onto syntactic heads and grammatical functions in the target language; a Target Lexicon which contains appropriate target lexemes for each domain concept; a Target Grammar for the target language which realizes target syntactic constructions as linearized output sentences. == Advantages == No bilingual texts are required. This makes it possible to create translation systems for languages that have no texts in common, or even no digitized data whatsoever. Domain independent. Rules are usually written in a domain independent manner, so the vast majority of rules will "just work" in every domain, and only a few specific cases per domain may need rules written for them. No quality ceiling. Every error can be corrected with a targeted rule, even if the trigger case is extremely rare. This is in contrast to statistical systems where infrequent forms will be washed away by default. Total control. Because all rules are hand-written, you can easily debug a rule-based system to see exactly where a given error enters the system, and why. Reusability. Because RBMT systems are generally built from a strong source language analysis that is fed to a transfer step and target language generator, the source language analysis and targe

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  • Weka (software)

    Weka (software)

    Waikato Environment for Knowledge Analysis (Weka) is a collection of machine learning and data analysis free software licensed under the GNU General Public License. It was developed at the University of Waikato, New Zealand, and is the companion software to the book "Data Mining: Practical Machine Learning Tools and Techniques". == Description == Weka contains a collection of visualization tools and algorithms for data analysis and predictive modeling, together with graphical user interfaces for easy access to these functions. The original non-Java version of Weka was a Tcl/Tk front-end to (mostly third-party) modeling algorithms implemented in other programming languages, plus data preprocessing utilities in C, and a makefile-based system for running machine learning experiments. This original version was primarily designed as a tool for analyzing data from agricultural domains, but the more recent fully Java-based version (Weka 3), for which development started in 1997, is now used in many different application areas, in particular for educational purposes and research. Advantages of Weka include: Free availability under the GNU General Public License. Portability, since it is fully implemented in the Java programming language and thus runs on almost any modern computing platform. A comprehensive collection of data preprocessing and modeling techniques. Ease of use due to its graphical user interfaces. Weka supports several standard data mining tasks, more specifically, data preprocessing, clustering, classification, regression, visualization, and feature selection. Input to Weka is expected to be formatted according the Attribute-Relational File Format and with the filename bearing the .arff extension. All of Weka's techniques are predicated on the assumption that the data is available as one flat file or relation, where each data point is described by a fixed number of attributes (normally, numeric or nominal attributes, but some other attribute types are also supported). Weka provides access to SQL databases using Java Database Connectivity and can process the result returned by a database query. Weka provides access to deep learning with Deeplearning4j. It is not capable of multi-relational data mining, but there is separate software for converting a collection of linked database tables into a single table that is suitable for processing using Weka. Another important area that is currently not covered by the algorithms included in the Weka distribution is sequence modeling. == Extension packages == In version 3.7.2, a package manager was added to allow the easier installation of extension packages. Some functionality that used to be included with Weka prior to this version has since been moved into such extension packages, but this change also makes it easier for others to contribute extensions to Weka and to maintain the software, as this modular architecture allows independent updates of the Weka core and individual extensions. == History == In 1993, the University of Waikato in New Zealand began development of the original version of Weka, which became a mix of Tcl/Tk, C, and makefiles. In 1997, the decision was made to redevelop Weka from scratch in Java, including implementations of modeling algorithms. In 2005, Weka received the SIGKDD Data Mining and Knowledge Discovery Service Award. In 2006, Pentaho Corporation acquired an exclusive licence to use Weka for business intelligence. It forms the data mining and predictive analytics component of the Pentaho business intelligence suite. Pentaho has since been acquired by Hitachi Vantara, and Weka now underpins the PMI (Plugin for Machine Intelligence) open source component. == Related tools == Auto-WEKA is an automated machine learning system for Weka. Environment for DeveLoping KDD-Applications Supported by Index-Structures (ELKI) is a similar project to Weka with a focus on cluster analysis, i.e., unsupervised methods. H2O.ai is an open-source data science and machine learning platform KNIME is a machine learning and data mining software implemented in Java. Massive Online Analysis (MOA) is an open-source project for large scale mining of data streams, also developed at the University of Waikato in New Zealand. Neural Designer is a data mining software based on deep learning techniques written in C++. Orange is a similar open-source project for data mining, machine learning and visualization based on scikit-learn. RapidMiner is a commercial machine learning framework implemented in Java which integrates Weka. scikit-learn is a popular machine learning library in Python.

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  • Wake-sleep algorithm

    Wake-sleep algorithm

    The wake-sleep algorithm is an unsupervised learning algorithm for deep generative models, especially Helmholtz Machines. The algorithm is similar to the expectation-maximization algorithm, and optimizes the model likelihood for observed data. The name of the algorithm derives from its use of two learning phases, the “wake” phase and the “sleep” phase, which are performed alternately. It can be conceived as a model for learning in the brain, but is also being applied for machine learning. == Description == The goal of the wake-sleep algorithm is to find a hierarchical representation of observed data. In a graphical representation of the algorithm, data is applied to the algorithm at the bottom, while higher layers form gradually more abstract representations. Between each pair of layers are two sets of weights: Recognition weights, which define how representations are inferred from data, and generative weights, which define how these representations relate to data. == Training == Training consists of two phases – the “wake” phase and the “sleep” phase. It has been proven that this learning algorithm is convergent. === The "wake" phase === Neurons are fired by recognition connections (from what would be input to what would be output). Generative connections (leading from outputs to inputs) are then modified to increase probability that they would recreate the correct activity in the layer below – closer to actual data from sensory input. === The "sleep" phase === The process is reversed in the “sleep” phase – neurons are fired by generative connections while recognition connections are being modified to increase probability that they would recreate the correct activity in the layer above – further to actual data from sensory input. == Extensions == Since the recognition network is limited in its flexibility, it might not be able to approximate the posterior distribution of latent variables well. To better approximate the posterior distribution, it is possible to employ importance sampling, with the recognition network as the proposal distribution. This improved approximation of the posterior distribution also improves the overall performance of the model.

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  • Crossover (evolutionary algorithm)

    Crossover (evolutionary algorithm)

    Crossover in evolutionary algorithms and evolutionary computation, also called recombination, is a genetic operator used to combine the genetic information of two parents to generate new offspring. It is one way to stochastically generate new solutions from an existing population, and is analogous to the crossover that happens during sexual reproduction in biology. New solutions can also be generated by cloning an existing solution, which is analogous to asexual reproduction. Newly generated solutions may be mutated before being added to the population. The aim of recombination is to transfer good characteristics from two different parents to one child. Different algorithms in evolutionary computation may use different data structures to store genetic information, and each genetic representation can be recombined with different crossover operators. Typical data structures that can be recombined with crossover are bit arrays, vectors of real numbers, or trees. The list of operators presented below is by no means complete and serves mainly as an exemplary illustration of this dyadic genetic operator type. More operators and more details can be found in the literature. == Crossover for binary arrays == Traditional genetic algorithms store genetic information in a chromosome represented by a bit array. Crossover methods for bit arrays are popular and an illustrative example of genetic recombination. === One-point crossover === A point on both parents' chromosomes is picked randomly, and designated a 'crossover point'. Bits to the right of that point are swapped between the two parent chromosomes. This results in two offspring, each carrying some genetic information from both parents. === Two-point and k-point crossover === In two-point crossover, two crossover points are picked randomly from the parent chromosomes. The bits in between the two points are swapped between the parent organisms. Two-point crossover is equivalent to performing two single-point crossovers with different crossover points. This strategy can be generalized to k-point crossover for any positive integer k, picking k crossover points. === Uniform crossover === In uniform crossover, typically, each bit is chosen from either parent with equal probability. Other mixing ratios are sometimes used, resulting in offspring which inherit more genetic information from one parent than the other. In a uniform crossover, we don’t divide the chromosome into segments, rather we treat each gene separately. In this, we essentially flip a coin for each chromosome to decide whether or not it will be included in the off-spring. == Crossover for integer or real-valued genomes == For the crossover operators presented above and for most other crossover operators for bit strings, it holds that they can also be applied accordingly to integer or real-valued genomes whose genes each consist of an integer or real-valued number. Instead of individual bits, integer or real-valued numbers are then simply copied into the child genome. The offspring lie on the remaining corners of the hyperbody spanned by the two parents P 1 = ( 1.5 , 6 , 8 ) {\displaystyle P_{1}=(1.5,6,8)} and P 2 = ( 7 , 2 , 1 ) {\displaystyle P_{2}=(7,2,1)} , as exemplified in the accompanying image for the three-dimensional case. === Discrete recombination === If the rules of the uniform crossover for bit strings are applied during the generation of the offspring, this is also called discrete recombination. === Intermediate recombination === In this recombination operator, the allele values of the child genome a i {\displaystyle a_{i}} are generated by mixing the alleles of the two parent genomes a i , P 1 {\displaystyle a_{i,P_{1}}} and a i , P 2 {\displaystyle a_{i,P_{2}}} : α i = α i , P 1 ⋅ β i + α i , P 2 ⋅ ( 1 − β i ) w i t h β i ∈ [ − d , 1 + d ] {\displaystyle \alpha _{i}=\alpha _{i,P_{1}}\cdot \beta _{i}+\alpha _{i,P_{2}}\cdot \left(1-\beta _{i}\right)\quad {\mathsf {with}}\quad \beta _{i}\in \left[-d,1+d\right]} randomly equally distributed per gene i {\displaystyle i} The choice of the interval [ − d , 1 + d ] {\displaystyle [-d,1+d]} causes that besides the interior of the hyperbody spanned by the allele values of the parent genes additionally a certain environment for the range of values of the offspring is in question. A value of 0.25 {\displaystyle 0.25} is recommended for d {\displaystyle d} to counteract the tendency to reduce the allele values that otherwise exists at d = 0 {\displaystyle d=0} . The adjacent figure shows for the two-dimensional case the range of possible new alleles of the two exemplary parents P 1 = ( 3 , 6 ) {\displaystyle P_{1}=(3,6)} and P 2 = ( 9 , 2 ) {\displaystyle P_{2}=(9,2)} in intermediate recombination. The offspring of discrete recombination C 1 {\displaystyle C_{1}} and C 2 {\displaystyle C_{2}} are also plotted. Intermediate recombination satisfies the arithmetic calculation of the allele values of the child genome required by virtual alphabet theory. Discrete and intermediate recombination are used as a standard in the evolution strategy. == Crossover for permutations == For combinatorial tasks, permutations are usually used that are specifically designed for genomes that are themselves permutations of a set. The underlying set is usually a subset of N {\displaystyle \mathbb {N} } or N 0 {\displaystyle \mathbb {N} _{0}} . If 1- or n-point or uniform crossover for integer genomes is used for such genomes, a child genome may contain some values twice and others may be missing. This can be remedied by genetic repair, e.g. by replacing the redundant genes in positional fidelity for missing ones from the other child genome. In order to avoid the generation of invalid offspring, special crossover operators for permutations have been developed which fulfill the basic requirements of such operators for permutations, namely that all elements of the initial permutation are also present in the new one and only the order is changed. It can be distinguished between combinatorial tasks, where all sequences are admissible, and those where there are constraints in the form of inadmissible partial sequences. A well-known representative of the first task type is the traveling salesman problem (TSP), where the goal is to visit a set of cities exactly once on the shortest tour. An example of the constrained task type is the scheduling of multiple workflows. Workflows involve sequence constraints on some of the individual work steps. For example, a thread cannot be cut until the corresponding hole has been drilled in a workpiece. Such problems are also called order-based permutations. In the following, two crossover operators are presented as examples, the partially mapped crossover (PMX) motivated by the TSP and the order crossover (OX1) designed for order-based permutations. A second offspring can be produced in each case by exchanging the parent chromosomes. === Partially mapped crossover (PMX) === The PMX operator was designed as a recombination operator for TSP like Problems. The explanation of the procedure is illustrated by an example: === Order crossover (OX1) === The order crossover goes back to Davis in its original form and is presented here in a slightly generalized version with more than two crossover points. It transfers information about the relative order from the second parent to the offspring. First, the number and position of the crossover points are determined randomly. The resulting gene sequences are then processed as described below: Among other things, order crossover is well suited for scheduling multiple workflows, when used in conjunction with 1- and n-point crossover. === Further crossover operators for permutations === Over time, a large number of crossover operators for permutations have been proposed, so the following list is only a small selection. For more information, the reader is referred to the literature. cycle crossover (CX) order-based crossover (OX2) position-based crossover (POS) edge recombination voting recombination (VR) alternating-positions crossover (AP) maximal preservative crossover (MPX) merge crossover (MX) sequential constructive crossover operator (SCX) The usual approach to solving TSP-like problems by genetic or, more generally, evolutionary algorithms, presented earlier, is either to repair illegal descendants or to adjust the operators appropriately so that illegal offspring do not arise in the first place. Alternatively, Riazi suggests the use of a double chromosome representation, which avoids illegal offspring.

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  • GPT-5

    GPT-5

    GPT-5 is a multimodal large language model developed by OpenAI and the fifth in its series of generative pre-trained transformer (GPT) foundation models. Preceded in the series by GPT-4, it was launched on August 7, 2025. It is publicly accessible to users of the chatbot products ChatGPT and Microsoft Copilot as well as to developers through the OpenAI API. == Background == On April 14, 2023, Sam Altman, the chief executive officer of OpenAI, spoke at an event at the Massachusetts Institute of Technology and said that the company was not training GPT-5 at that time. He stated that OpenAI was "prioritizing GPT-4 development" and that "we are not and won't for some time" release GPT-5. On July 18, OpenAI filed for a "GPT-5" trademark in the United States. On November 13, Altman confirmed to the Financial Times that the company was working to develop GPT-5. According to The Information, "[f]or much of the second half of 2024, OpenAI was developing a model known internally as Orion and intended to become GPT-5", "[b]ut the Orion effort failed to produce a better model, and the company instead released it as GPT-4.5 in February [2025]." By late July 2025, OpenAI was widely anticipated as planning to release GPT-5 in early August. On July 30, The Verge reported that "Microsoft is getting ready for GPT-5" as "sources familiar with Microsoft's AI plans" told an editor that the company was testing a new mode for its Copilot chatbot that would offer a model that "thinks deeply or quickly based on the task". On August 5, in the leadup to the release of GPT-5, OpenAI released GPT-OSS, a set of two open-weight models that have reasoning capabilities. GPT-5 was then unveiled during a livestream event on August 7. == Capabilities == At the time of its release, GPT-5 had state-of-the-art performance on benchmarks that test mathematics, programming, finance, and multimodal understanding. According to OpenAI, improvements over its predecessor models include faster response times, better coding and writing skills, more accurate answers to health questions, and lower levels of hallucination. Also, compared to previous models, GPT-5 aims to give safe, high-level responses to potentially harmful queries rather than outright declining them, an approach that OpenAI refers to as "safe completions", aiming to result "in GPT-5 being able to refuse more unsafe questions, while offering fewer rejections to users seeking harmless information." In addition, GPT-5 was trained to give more critical, "less effusively agreeable" answers compared to its predecessor models. Days before the launch of GPT-5, two early testers of the model stated that they were "impressed" by its ability to code and to solve mathematical and scientific problems. They suggested that the model shows great improvement from GPT-4, but not as large of a gain as from GPT-3 to GPT-4. A day prior to the release of GPT-5, during a press briefing, Sam Altman, the chief executive officer of OpenAI, called GPT-5 "a significant step along the path to AGI", referring to artificial general intelligence, the hypothetical level of intelligence that OpenAI defines as the ability to perform any economically valuable task that a human can. According to Altman, GPT-5 is "significantly better" than its predecessors, offering "PhD-level" abilities across a wide range of tasks. The exact energy consumption of GPT-5 use has not been disclosed by OpenAI. Researchers at the University of Rhode Island estimated that a medium-length response consumes slightly over 18 watt-hours, equivalent to using an incandescent bulb for 18 minutes. === Architecture === GPT-5 is a system that contains a fast, high-throughput model, a deeper reasoning model, and a real-time router that decides which model to use based on conversation type, complexity, tool needs, and explicit user intent. Altman had previously criticized the manual model picker for being overly complex, suggesting a need for unification. GPT-5 also includes agentic functionality through which it can set up its own desktop and can use its browser to search autonomously for sources that relate to its task. The GPT-5 system card defines two fast, high-throughput models – gpt-5-main and gpt-5-main-mini – and two thinking models – gpt-5-thinking and gpt-5-thinking-mini. In the OpenAI API, developers can access the thinking model, its mini version, and gpt-5-thinking-nano, an even smaller and faster nano version of the thinking model. The version of GPT-5 that is accessible via the API has adjustable reasoning effort (low, medium, high, or minimal) and verbosity (low, medium, or high). Additionally, ChatGPT provides access to gpt-5-thinking with a setting that makes use of parallel test-time compute, referred to as gpt-5-thinking-pro. == Limitations == === Safety === Neuraltrust, a security research company, claimed to have successfully compromised GPT-5 within its first day of testing the model. According to its report, it enabled GPT-5 to generate detailed instructions for manufacturing explosive devices. SPLX, another company, conducted similar tests and came to similar conclusions about GPT-5's security. Their assessments suggest that GPT-5 has significant security gaps, potentially rendering it as being unsafe for use in a corporate environment. == Training == According to AIMultiple, GPT-5 is natively multimodal, meaning that it was trained from scratch on multiple modalities (like text and images) at once without relying on already-trained language or vision models. Its training process involved three stages: unsupervised pretraining, supervised fine-tuning, and reinforcement learning from human feedback. Pretraining used a large-scale multilingual dataset of books, articles, web pages, academic papers, and licensed sources. GPT-5's visual and text capabilities were described as having been developed alongside each other throughout training, unlike with GPT-4. == Use == GPT-5 is used in ChatGPT. Although GPT-5 is free for all ChatGPT users, Plus users get higher use limits while Pro users get unlimited access to GPT-5 as well as limited access to GPT-5 Pro. Standard limits for lower-tier users on responses per hour still apply. Additionally, with the introduction of GPT-5, ChatGPT's "Advanced Voice Mode" was replaced by "ChatGPT Voice", which is supposed to enable more natural-sounding conversations. OpenAI stated that "Standard Voice Mode retires on September 9, 2025, unifying all users on ChatGPT Voice". On November 24, 2025, the feature of shopping research was added to ChatGPT, claimed to be a mini model post-trained on gpt-5-thinking-mini. GPT-5 is also available in Microsoft Copilot, and Microsoft stated that it will incorporate GPT-5 into a wide variety of its products. According to 9to5Mac, Apple Inc. is planning to integrate the model into the Apple Intelligence feature in its iOS 26, iPadOS 26, and macOS Tahoe operating systems. It is also accessible via the OpenAI API. A number of American companies were reported as having received access to GPT-5 ahead of its launch. OpenAI stated that the private health insurance company Oscar Health was checking applications from its policyholders with the model. In addition, Uber was using GPT-5 for its customer support system; GitLab, Windsurf, and Cursor were using the model for software development; and the Spanish bank BBVA was using it for financial analysis. Other companies that OpenAI listed as having used GPT-5 pre-release include Amgen, Lowe's, and Notion. == Reception == === Critical reviews === Grace Huckins in MIT Technology Review found that, "[w]hereas o1 was a major technological advancement, GPT-5 is, above all else, a refined product." In response to claims that Sam Altman, the chief executive officer of OpenAI, had made about the model, she stated that "GPT-5 will furnish a more pleasant and seamless user experience. That's not nothing, but it falls far short of the transformative AI future that Altman has spent much of the past year hyping." In response to Altman's claim that GPT-5 is "a significant step along the path" to artificial general intelligence, she noted: "[M]aybe he's right—but if so, it's a very small step." In The Information, Stephanie Palazzolo praised GPT-5's coding capabilities. According to Matteo Wong in The Atlantic, GPT-5 "is intuitive, fast, and efficient; adapts to human preferences and intentions; and is easy to personalize." He stated: "At this stage of the AI boom, when every major chatbot is legitimately helpful in numerous ways, benchmarks, science, and rigor feel almost insignificant. What matters is how the chatbot feels [...]". John Herrman from the New York magazine wrote: "Casual users who encounter GPT-5 through ChatGPT aren't likely to feel like they're using a completely different product [...] while people who use it for software development or in a corporate context are more likely to notice a major change." Mashable's Christian de Looper found that "GPT-5

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  • T-distributed stochastic neighbor embedding

    T-distributed stochastic neighbor embedding

    t-distributed stochastic neighbor embedding (t-SNE) is a statistical method for visualizing high-dimensional data by giving each datapoint a location in a two or three-dimensional map. It is based on Stochastic Neighbor Embedding originally developed by Geoffrey Hinton and Sam Roweis, where Laurens van der Maaten and Hinton proposed the t-distributed variant. It is a nonlinear dimensionality reduction technique for embedding high-dimensional data for visualization in a low-dimensional space of two or three dimensions. Specifically, it models each high-dimensional object by a two- or three-dimensional point in such a way that similar objects are modeled by nearby points and dissimilar objects are modeled by distant points with high probability. The t-SNE algorithm comprises two main stages. First, t-SNE constructs a probability distribution over pairs of high-dimensional objects in such a way that similar objects are assigned a higher probability while dissimilar points are assigned a lower probability. Second, t-SNE defines a similar probability distribution over the points in the low-dimensional map, and it minimizes the Kullback–Leibler divergence (KL divergence) between the two distributions with respect to the locations of the points in the map. While the original algorithm uses the Euclidean distance between objects as the base of its similarity metric, this can be changed as appropriate. A Riemannian variant is UMAP. t-SNE has been used for visualization in a wide range of applications, including genomics, computer security research, natural language processing, music analysis, cancer research, bioinformatics, geological domain interpretation, and biomedical signal processing. For a data set with n {\displaystyle n} elements, t-SNE runs in O ( n 2 ) {\displaystyle O(n^{2})} time and requires O ( n 2 ) {\displaystyle O(n^{2})} space. == Details == Given a set of N {\displaystyle N} high-dimensional objects x 1 , … , x N {\displaystyle \mathbf {x} _{1},\dots ,\mathbf {x} _{N}} , t-SNE first computes probabilities p i j {\displaystyle p_{ij}} that are proportional to the similarity of objects x i {\displaystyle \mathbf {x} _{i}} and x j {\displaystyle \mathbf {x} _{j}} , as follows. For i ≠ j {\displaystyle i\neq j} , define p j ∣ i = exp ⁡ ( − ‖ x i − x j ‖ 2 / 2 σ i 2 ) ∑ k ≠ i exp ⁡ ( − ‖ x i − x k ‖ 2 / 2 σ i 2 ) {\displaystyle p_{j\mid i}={\frac {\exp(-\lVert \mathbf {x} _{i}-\mathbf {x} _{j}\rVert ^{2}/2\sigma _{i}^{2})}{\sum _{k\neq i}\exp(-\lVert \mathbf {x} _{i}-\mathbf {x} _{k}\rVert ^{2}/2\sigma _{i}^{2})}}} and set p i ∣ i = 0 {\displaystyle p_{i\mid i}=0} . Note the above denominator ensures ∑ j p j ∣ i = 1 {\displaystyle \sum _{j}p_{j\mid i}=1} for all i {\displaystyle i} . As van der Maaten and Hinton explained: "The similarity of datapoint x j {\displaystyle x_{j}} to datapoint x i {\displaystyle x_{i}} is the conditional probability, p j | i {\displaystyle p_{j|i}} , that x i {\displaystyle x_{i}} would pick x j {\displaystyle x_{j}} as its neighbor if neighbors were picked in proportion to their probability density under a Gaussian centered at x i {\displaystyle x_{i}} ." Now define p i j = p j ∣ i + p i ∣ j 2 N {\displaystyle p_{ij}={\frac {p_{j\mid i}+p_{i\mid j}}{2N}}} This is motivated because p i {\displaystyle p_{i}} and p j {\displaystyle p_{j}} from the N samples are estimated as 1/N, so the conditional probability can be written as p i ∣ j = N p i j {\displaystyle p_{i\mid j}=Np_{ij}} and p j ∣ i = N p j i {\displaystyle p_{j\mid i}=Np_{ji}} . Since p i j = p j i {\displaystyle p_{ij}=p_{ji}} , you can obtain previous formula. Also note that p i i = 0 {\displaystyle p_{ii}=0} and ∑ i , j p i j = 1 {\displaystyle \sum _{i,j}p_{ij}=1} . The bandwidth of the Gaussian kernels σ i {\displaystyle \sigma _{i}} is set in such a way that the entropy of the conditional distribution equals a predefined entropy using the bisection method. As a result, the bandwidth is adapted to the density of the data: smaller values of σ i {\displaystyle \sigma _{i}} are used in denser parts of the data space. The entropy increases with the perplexity of this distribution P i {\displaystyle P_{i}} ; this relation is seen as P e r p ( P i ) = 2 H ( P i ) {\displaystyle Perp(P_{i})=2^{H(P_{i})}} where H ( P i ) {\displaystyle H(P_{i})} is the Shannon entropy H ( P i ) = − ∑ j p j | i log 2 ⁡ p j | i . {\displaystyle H(P_{i})=-\sum _{j}p_{j|i}\log _{2}p_{j|i}.} The perplexity is a hand-chosen parameter of t-SNE, and as the authors state, "perplexity can be interpreted as a smooth measure of the effective number of neighbors. The performance of SNE is fairly robust to changes in the perplexity, and typical values are between 5 and 50.". Since the Gaussian kernel uses the Euclidean distance ‖ x i − x j ‖ {\displaystyle \lVert x_{i}-x_{j}\rVert } , it is affected by the curse of dimensionality, and in high dimensional data when distances lose the ability to discriminate, the p i j {\displaystyle p_{ij}} become too similar (asymptotically, they would converge to a constant). It has been proposed to adjust the distances with a power transform, based on the intrinsic dimension of each point, to alleviate this. t-SNE aims to learn a d {\displaystyle d} -dimensional map y 1 , … , y N {\displaystyle \mathbf {y} _{1},\dots ,\mathbf {y} _{N}} (with y i ∈ R d {\displaystyle \mathbf {y} _{i}\in \mathbb {R} ^{d}} and d {\displaystyle d} typically chosen as 2 or 3) that reflects the similarities p i j {\displaystyle p_{ij}} as well as possible. To this end, it measures similarities q i j {\displaystyle q_{ij}} between two points in the map y i {\displaystyle \mathbf {y} _{i}} and y j {\displaystyle \mathbf {y} _{j}} , using a very similar approach. Specifically, for i ≠ j {\displaystyle i\neq j} , define q i j {\displaystyle q_{ij}} as q i j = ( 1 + ‖ y i − y j ‖ 2 ) − 1 ∑ k ∑ l ≠ k ( 1 + ‖ y k − y l ‖ 2 ) − 1 {\displaystyle q_{ij}={\frac {(1+\lVert \mathbf {y} _{i}-\mathbf {y} _{j}\rVert ^{2})^{-1}}{\sum _{k}\sum _{l\neq k}(1+\lVert \mathbf {y} _{k}-\mathbf {y} _{l}\rVert ^{2})^{-1}}}} and set q i i = 0 {\displaystyle q_{ii}=0} . Herein a heavy-tailed Student t-distribution (with one-degree of freedom, which is the same as a Cauchy distribution) is used to measure similarities between low-dimensional points in order to allow dissimilar objects to be modeled far apart in the map. The locations of the points y i {\displaystyle \mathbf {y} _{i}} in the map are determined by minimizing the (non-symmetric) Kullback–Leibler divergence of the distribution P {\displaystyle P} from the distribution Q {\displaystyle Q} , that is: K L ( P ∥ Q ) = ∑ i ≠ j p i j log ⁡ p i j q i j {\displaystyle \mathrm {KL} \left(P\parallel Q\right)=\sum _{i\neq j}p_{ij}\log {\frac {p_{ij}}{q_{ij}}}} The minimization of the Kullback–Leibler divergence with respect to the points y i {\displaystyle \mathbf {y} _{i}} is performed using gradient descent. The result of this optimization is a map that reflects the similarities between the high-dimensional inputs. == Output == While t-SNE plots often seem to display clusters, the visual clusters can be strongly influenced by the chosen parameterization (especially the perplexity) and so a good understanding of the parameters for t-SNE is needed. Such "clusters" can be shown to even appear in structured data with no clear clustering, and so may be false findings. Similarly, the size of clusters produced by t-SNE is not informative, and neither is the distance between clusters. Thus, interactive exploration may be needed to choose parameters and validate results. It has been shown that t-SNE can often recover well-separated clusters, and with special parameter choices, approximates a simple form of spectral clustering. == Software == A C++ implementation of Barnes-Hut is available on the github account of one of the original authors. The R package Rtsne implements t-SNE in R. ELKI contains tSNE, also with Barnes-Hut approximation scikit-learn, a popular machine learning library in Python implements t-SNE with both exact solutions and the Barnes-Hut approximation. Tensorboard, the visualization kit associated with TensorFlow, also implements t-SNE (online version) The Julia package TSne implements t-SNE

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  • Linguamatics

    Linguamatics

    Linguamatics, headquartered in Cambridge, England, with offices in the United States and UK, is a provider of text mining systems through software licensing and services, primarily for pharmaceutical and healthcare applications. Founded in 2001, the company was purchased by IQVIA in January 2019. == Technology == The company develops enterprise search tools for the life sciences sector. The core natural language processing engine (I2E) uses a federated architecture to incorporate data from 3rd party resources. Initially developed to be used interactively through a graphic user interface, the core software also has an application programming interface that can be used to automate searches. LabKey, Penn Medicine, Atrius Health and Mercy all use Linguamatics software to extract electronic health record data into data warehouses. Linguamatics software is used by 17 of the top 20 global pharmaceutical companies, the US Food and Drug Administration, as well as healthcare providers. == Software community == The core software, "I2E", is used by a number of companies to either extend their own software or to publish their data. Copyright Clearance Center uses I2E to produce searchable indexes of material that would otherwise be unsearchable due to copyright. Thomson Reuters produces Cortellis Informatics Clinical Text Analytics, which depends on I2E to make clinical data accessible and searchable. Pipeline Pilot can integrate I2E as part of a workflow. ChemAxon can be used alongside I2E to allow named entity recognition of chemicals within unstructured data. Data sources include MEDLINE, ClinicalTrials.gov, FDA Drug Labels, PubMed Central, and Patent Abstracts.

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