The Visualization Handbook is a textbook by Charles D. Hansen and Christopher R. Johnson that serves as a survey of the field of scientific visualization by presenting the basic concepts and algorithms in addition to a current review of visualization research topics and tools. It is commonly used as a textbook for scientific visualization graduate courses. It is also commonly cited as a reference for scientific visualization and computer graphics in published papers, with almost 500 citations documented on Google Scholar. == Table of Contents == PART I - Introduction Overview of Visualization - William J. Schroeder and Kenneth M. Martin PART II - Scalar Field Visualization: Isosurfaces Accelerated Isosurface Extraction Approaches -Yarden Livnat Time-Dependent Isosurface Extraction - Han-Wei Shen Optimal Isosurface Extraction - Paolo Cignoni, Claudio Montani, Robert Scopigno, and Enrico Puppo Isosurface Extraction Using Extrema Graphs - Takayuki Itoh and Koji Koyamada Isosurfaces and Level-Sets - Ross Whitaker PART III - Scalar Field Visualization: Volume Rendering Overview of Volume Rendering - Arie E. Kaufman and Klaus Mueller Volume Rendering Using Splatting - Roger Crawfis, Daqing Xue, and Caixia Zhang Multidimensional Transfer Functions for Volume Rendering - Joe Kniss, Gordon Kindlmann, and Charles D. Hansen Pre-Integrated Volume Rendering - Martin Kraus and Thomas Ertl Hardware-Accelerated Volume Rendering - Hanspeter Pfister PART IV - Vector Field Visualization Overview of Flow Visualization - Daniel Weiskopf and Gordon Erlebacher Flow Textures: High-Resolution Flow Visualization - Gordon Erlebacher, Bruno Jobard, and Daniel Weiskopf Detection and Visualization of Vortices - Ming Jiang, Raghu Machiraju, and David Thompson PART V - Tensor Field Visualization Oriented Tensor Reconstruction - Leonid Zhukov and Alan H. Barr Diffusion Tensor MRI Visualization - Song Zhang, David Laidlaw, and Gordon Kindlmann Topological Methods for Flow Visualization - Gerik Scheuermann and Xavier Tricoche PART VI - Geometric Modeling for Visualization 3D Mesh Compression - Jarek Rossignac Variational Modeling Methods for Visualization - Hans Hagen and Ingrid Hotz Model Simplification - Jonathan D. Cohen and Dinesh Manocha PART VII - Virtual Environments for Visualization Direct Manipulation in Virtual Reality - Steve Bryson The Visual Haptic Workbench - Milan Ikits and J. Dean Brederson Virtual Geographic Information Systems - William Ribarsky Visualization Using Virtual Reality - R. Bowen Loftin, Jim X. Chen, and Larry Rosenblum PART VIII - Large-Scale Data Visualization Desktop Delivery: Access to Large Datasets - Philip D. Heermann and Constantine Pavlakos Techniques for Visualizing Time-Varying Volume Data - Kwan-Liu Ma and Eric B. Lum Large-Scale Data Visualization and Rendering: A Problem-Driven Approach - Patrick McCormick and James Ahrens Issues and Architectures in Large-Scale Data Visualization - Constantine Pavlakos and Philip D. Heermann Consuming Network Bandwidth with Visapult - Wes Bethel and John Shalf PART IX - Visualization Software and Frameworks The Visualization Toolkit - William J. Schroeder and Kenneth M. Martin Visualization in the SCIRun Problem-Solving Environment - David M. Weinstein, Steven Parker, Jenny Simpson, Kurt Zimmerman, and Greg M. Jones Numerical Algorithms Group IRIS Explorer - Jeremy Walton AVS and AVS/Express - Jean M. Favre and Mario Valle Vis5D, Cave5D, and VisAD - Bill Hibbard Visualization with AVS - W. T. Hewitt, Nigel W. John, Matthew D. Cooper, K. Yien Kwok, George W. Leaver, Joanna M. Leng, Paul G. Lever, Mary J. McDerby, James S. Perrin, Mark Riding, I. Ari Sadarjoen, Tobias M. Schiebeck, and Colin C. Venters ParaView: An End-User Tool for Large-Data Visualization - James Ahrens, Berk Geveci, and Charles Law The Insight Toolkit: An Open-Source Initiative in Data Segmentation and Registration - Terry S. Yoo amira: A Highly Interactive System for Visual Data Analysis - Detlev Stalling, Malte Westerhoff, and Hans-Christian Hege PART X - Perceptual Issues in Visualization Extending Visualization to Perceptualization: The Importance of Perception in Effective Communication of Information - David S. Ebert Art and Science in Visualization - Victoria Interrante Exploiting Human Visual Perception in Visualization - Alan Chalmers and Kirsten Cater PART XI - Selected Topics and Applications Scalable Network Visualization - Stephen G. Eick Visual Data-Mining Techniques - Daniel A. Keim, Mike Sips, and Mihael Ankerst Visualization in Weather and Climate Research - Don Middleton, Tim Scheitlin, and Bob Wilhelmson Painting and Visualization - Robert M. Kirby, Daniel F. Keefe, and David Laidlaw Visualization and Natural Control Systems for Microscopy - Russell M. Taylor II, David Borland, Frederick P. Brooks, Jr., Mike Falvo, Kevin Jeffay, Gail Jones, David Marshburn, Stergios J. Papadakis, Lu-Chang Qin, Adam Seeger, F. Donelson Smith, Dianne Sonnenwald, Richard Superfine, Sean Washburn, Chris Weigle, Mary Whitton, Leandra Vicci, Martin Guthold, Tom Hudson, Philip Williams, and Warren Robinett Visualization for Computational Accelerator Physics - Kwan-Liu Ma, Greg Schussman, and Brett Wilson
Cloud testing
Cloud testing is a form of software testing in which web applications use cloud computing environments (a "cloud") to simulate real-world user traffic. == Steps == Companies simulate real world Web users by using cloud testing services that are provided by cloud service vendors such as Advaltis, Compuware, HP, Keynote Systems, Neotys, RadView and SOASTA. Once user scenarios are developed and the test is designed, these service providers leverage cloud servers (provided by cloud platform vendors such as Amazon.com, Google, Rackspace, Microsoft, etc.) to generate web traffic that originates from around the world. Once the test is complete, the cloud service providers deliver results and analytics back to corporate IT professionals through real-time dashboards for a complete analysis of how their applications and the internet will perform during peak volumes. == Applications == Cloud testing is often seen as only performance or load tests, however, as discussed earlier it covers many other types of testing. Cloud computing itself is often referred to as the marriage of software as a service (SaaS) and utility computing. In regard to test execution, the software offered as a service may be a transaction generator and the cloud provider's infrastructure software, or may just be the latter. Distributed Systems and Parallel Systems mainly use this approach for testing, because of their inherent complex nature. D-Cloud is an example of such a software testing environment. == Tools == Leading cloud computing service providers include, among others, Amazon, Microsoft, Google, RadView, Skytap, HP and SOASTA. == Benefits == The ability and cost to simulate web traffic for software testing purposes has been an inhibitor to overall web reliability. The low cost and accessibility of the cloud's extremely large computing resources provides the ability to replicate real world usage of these systems by geographically distributed users, executing wide varieties of user scenarios, at scales previously unattainable in traditional testing environments. Minimal start-up time along with quality assurance can be achieved by cloud testing. Following are some of the key benefits: Reduction in capital expenditure Highly scalable
Multi expression programming
Multi Expression Programming (MEP) is an evolutionary algorithm for generating mathematical functions describing a given set of data. MEP is a Genetic Programming variant encoding multiple solutions in the same chromosome. MEP representation is not specific (multiple representations have been tested). In the simplest variant, MEP chromosomes are linear strings of instructions. This representation was inspired by Three-address code. MEP strength consists in the ability to encode multiple solutions, of a problem, in the same chromosome. In this way, one can explore larger zones of the search space. For most of the problems this advantage comes with no running-time penalty compared with genetic programming variants encoding a single solution in a chromosome. == Representation == MEP chromosomes are arrays of instructions represented in Three-address code format. Each instruction contains a variable, a constant, or a function. If the instruction is a function, then the arguments (given as instruction's addresses) are also present. === Example of MEP program === Here is a simple MEP chromosome (labels on the left side are not a part of the chromosome): 1: a 2: b 3: + 1, 2 4: c 5: d 6: + 4, 5 7: 3, 5 == Fitness computation == When the chromosome is evaluated it is unclear which instruction will provide the output of the program. In many cases, a set of programs is obtained, some of them being completely unrelated (they do not have common instructions). For the above chromosome, here is the list of possible programs obtained during decoding: E1 = a, E2 = b, E4 = c, E5 = d, E3 = a + b. E6 = c + d. E7 = (a + b) d. Each instruction is evaluated as a possible output of the program. The fitness (or error) is computed in a standard manner. For instance, in the case of symbolic regression, the fitness is the sum of differences (in absolute value) between the expected output (called target) and the actual output. == Fitness assignment process == Which expression will represent the chromosome? Which one will give the fitness of the chromosome? In MEP, the best of them (which has the lowest error) will represent the chromosome. This is different from other GP techniques: In Linear genetic programming the last instruction will give the output. In Cartesian Genetic Programming the gene providing the output is evolved like all other genes. Note that, for many problems, this evaluation has the same complexity as in the case of encoding a single solution in each chromosome. Thus, there is no penalty in running time compared to other techniques. == Software == === MEPX === MEPX is a cross-platform (Windows, macOS, and Linux Ubuntu) free software for the automatic generation of computer programs. It can be used for data analysis, particularly for solving symbolic regression, statistical classification and time-series problems. === libmep === Libmep is a free and open source library implementing Multi Expression Programming technique. It is written in C++. === hmep === hmep is a new open source library implementing Multi Expression Programming technique in Haskell programming language.
Vowpal Wabbit
Vowpal Wabbit (VW) is an open-source fast online interactive machine learning system library and program developed originally at Yahoo! Research, and currently at Microsoft Research. It was started and is led by John Langford. Vowpal Wabbit's interactive learning support is particularly notable including Contextual Bandits, Active Learning, and forms of guided Reinforcement Learning. Vowpal Wabbit provides an efficient scalable out-of-core implementation with support for a number of machine learning reductions, importance weighting, and a selection of different loss functions and optimization algorithms. == Notable features == The VW program supports: Multiple supervised (and semi-supervised) learning problems: Classification (both binary and multi-class) Regression Active learning (partially labeled data) for both regression and classification Multiple learning algorithms (model-types / representations) OLS regression Matrix factorization (sparse matrix SVD) Single layer neural net (with user specified hidden layer node count) Searn (Search and Learn) Latent Dirichlet Allocation (LDA) Stagewise polynomial approximation Recommend top-K out of N One-against-all (OAA) and cost-sensitive OAA reduction for multi-class Weighted all pairs Contextual-bandit (with multiple exploration/exploitation strategies) Multiple loss functions: squared error quantile hinge logistic poisson Multiple optimization algorithms Stochastic gradient descent (SGD) BFGS Conjugate gradient Regularization (L1 norm, L2 norm, & elastic net regularization) Flexible input - input features may be: Binary Numerical Categorical (via flexible feature-naming and the hash trick) Can deal with missing values/sparse-features Other features On the fly generation of feature interactions (quadratic and cubic) On the fly generation of N-grams with optional skips (useful for word/language data-sets) Automatic test-set holdout and early termination on multiple passes bootstrapping User settable online learning progress report + auditing of the model Hyperparameter optimization == Scalability == Vowpal wabbit has been used to learn a tera-feature (1012) data-set on 1000 nodes in one hour. Its scalability is aided by several factors: Out-of-core online learning: no need to load all data into memory The hashing trick: feature identities are converted to a weight index via a hash (uses 32-bit MurmurHash3) Exploiting multi-core CPUs: parsing of input and learning are done in separate threads. Compiled C++ code
Pruning (artificial neural network)
In deep learning, pruning is the practice of removing parameters from an existing artificial neural network. The goal of this process is to reduce the size (parameter count) of the neural network (and therefore the computational resources required to run it) whilst maintaining accuracy. This can be compared to the biological process of synaptic pruning which takes place in mammalian brains during development. == Node (neuron) pruning == A basic algorithm for pruning is as follows: Evaluate the importance of each neuron. Rank the neurons according to their importance (assuming there is a clearly defined measure for "importance"). Remove the least important neuron. Check a termination condition (to be determined by the user) to see whether to continue pruning. == Edge (weight) pruning == Most work on neural network pruning does not remove full neurons or layers (structured pruning). Instead, it focuses on removing the most insignificant weights (unstructured pruning), namely, setting their values to zero. This can either be done globally by comparing weights from all layers in the network or locally by comparing weights in each layer separately. Different metrics can be used to measure the importance of each weight. Weight magnitude as well as combinations of weight and gradient information are commonly used metrics. Early work suggested also to change the values of non-pruned weights. == When to prune the neural network? == Pruning can be applied at three different stages: before training, during training, or after training. When pruning is performed during or after training, additional fine-tuning epochs are typically required. Each approach involves different trade-offs between accuracy and computational cost.
EXAPT
EXAPT (a portmanteau of "Extended Subset of APT") is a production-oriented programming language that allows users to generate NC programs with control information for machining tools and facilitates decision-making for production-related issues that may arise during various machining processes. EXAPT was first developed to address industrial requirements. Through the years, the company created additional software for the manufacturing industry. Today, EXAPT offers a suite of SAAS products and services for the manufacturing industry. The trade name, EXAPT, is most commonly associated with the CAD/CAM-System, production data, and tool management software of the German company EXAPT Systemtechnik GmbH based in Aachen, DE. == General == EXAPT is a modularly built programming system for all NC machining operations as Drilling Turning Milling Turn-Milling Nibbling Flame-, laser-, plasma- and water jet cutting Wire eroding Operations with industrial robots Due to the modular structure, the main product groups, EXAPTcam and EXAPTpdo, are gradually expandable and permit individual software for the manufacturing industry used individually and also in a compound with an existing IT environment. == Functionality == EXAPTcam meets the requirements for NC planning, especially for the cutting operations such as turning, drilling, and milling up to 5-axis simultaneous machining. Thereby new process technologies, tool, and machine concepts are constantly involved. In the NC programming data from different sources such as 3D CAD models, drawings or tables can flow in. The possibilities of NC programming reaches from language-oriented to feature-oriented NC programming. The integrated EXAPT knowledge database and intelligent and scalable automatisms support the user. The EXAPT NC planning also covers the generation of production information as clamping and tool plans, presetting data or time calculations. The realistic simulation possibilities of NC planning and NC control data provide with production reliability. EXAPTpdo (EXAPT ProductionsDataOrganization) provides a neutrally applicable technology platform for the information compound of the NC planning - to the shop floor. This applies to all NC production data that are necessary for the set-up of NC machines, for the provision, presetting, and stocking of manufacturing resources and provided by EXAPTpdo in a central database. Besides classical functions of the tool management system (TMS) as the management of cutting tools, measuring, testing and clamping devices the technology data management and tool lifecycle management (TLM) is also included. System-supported "where-used lists" helps to handle the manufacturing resource cycle by secured requirement determination and requirement fulfillment. Unnecessary transports and unplanned dispositive adjustments are dropped, stocks are reduced, set-up times reduced and the throughput is increased. EXAPTpdo synchronizes involved systems within the value chain. Stock systems, MES systems or ERP systems (e.g. from the purchasing or production areas) do not work in isolation from each other but they interact with each other. EXAPTpdo provides the base to Smart Factory, for more flexibility in production and faster communication. == History == With the foundation of the EXAPT-Verein in 1967 as spin-off of the universities Aachen, Berlin and Stuttgart the further development "EXAPT (EXtended Subset of APT)" of the programming language "APT (Automatically Programmed Tool)" was focused and so the first milestone for the EXAPT history was set. In the same year the system EXAPT 1 for drilling and simple milling tasks became available. 1969 The industrial application of EXAPT 2 for the programming of NC machines with 2-axis linear and path control begins. In the following year, the development of the EXAPT modular system starts. 1972 BASIC-EXAPT is provided for the universal, homogeneous programming of all NC tasks. The support is made by the EXAPT applications consultancy. 1973 EXAPT 1.1 is provided for the programming of straight-cut and continuous-path controlled drilling and milling machines and machining centers. At the Hanover Fair (IHA 73) the interactive access to a mainframe via a time-sharing terminal for the part program entry and correction is presented and starts the replacement of the punch card. 1974 The possibilities for the use of process computers for the NC data transfer are leveled out. EXAPT offers the possibility of the result simulation when using plotters with display of tool paths and tools in assignment to the workpiece. In April 1975, the EXAPT NC Systemtechnik GmbH was founded with the aim, of enabling entry into the NC technique for small and medium-sized companies by a complete product and service program. In the following year, the system portfolio is extended with further system modules and service programs and the provision of postprocessors. 1978 The development activities on the EXAPT module system started in 1970 are completed. Using modern software techniques, the different system parts BASIC-EXAPT, EXAPT 1, EXAPT 1.1, and EXAPT 2 are composed of a total system. System support and applications consultancy become a new working focus. From the beginning to the middle of the 1980s Beside new portable software modules for CAD/CAM applications (e. g. CAPEX, NESTEX, CADEX, CADCPL), the first version of the EXAPT DNC system and extensions of the EXAPT NC programming system for the machining of sculptured surfaces are presented. 1988 EXAPT expands the software product range by systems for tool data management (BMO) and production data management (FDO). EXAPT trains more than 1,300 course participants including company-specific courses. 1992 The first version of the completely new product generation EXAPTplus is presented and the agency in Dresden is opened. 1993 The company name "EXAPT NC Systemtechnik GmbH" is changed to "EXAPT Systemtechnik GmbH." EXAPTplus is presented on PC under Windows NT at the EMO '93. The decentralization of the use of EXAPT systems expands the range of applications. In the following year, EXAPT-DNC is executable under Windows on a customary PC. Special hardware is not needed and so it can be used in compound with the database-supported EXAPT production data management system (FDO). 1995 EXAPTplus is also ready for complex application cases such as machining of tubes at extrusion tools. EXAPT-CADI provides the transfer of 2D CAD data to EXAPTplus. With the new office Gießen the marketing is strengthened. In the following year the EXAPT NC editor is developed for the direct processing of NC control data with tool path display and visualization of the tools. In the course of the market entry of more comfortable 3D CAD systems for the solid modelling of components a detailed evaluation of current systems is made in 1997. It is decided to use SolidWorks as a reference system for the solid-oriented NC planning with EXAPT. 1998 The first solution for the transfer of geometry data between SolidWorks and EXAPTplus is generated. The EXAPT organization systems are (beside SQL) also executable under Oracle now. The use of client server solutions supports the data flow in the production. 1999 AFR functions are provided in connection with EXAPTsolid to support a workpiece modelling for NC. The millennium capability is ensured for all EXAPT systems. AFR is a ground-breaking for the integration of third-party products. 2002 EXAPT-BMG is developed for the generation and visualization of tools with additional functions for the assembly from components. The acquisition of tools with their geometric and technological presentation offers extensive support of the NC planning with EXAPT systems. 2003 EXAPTpdo is available to optimize the process chains in production planning and production execution optimally regarding the increasing requirements of changing production conditions. 2004 Diverse system extensions are made in EXAPTplus, EXAPTsolid, EXAPT NC editor, EXAPTpdo for the complete machining on turning/milling centres with result reliability because of more extensive simulation based on realNC (Tecnomatix), for the use of new complex tool systems and the compound use between ERP systems as SAP and intelligent CNC systems. In the following year, EXAPTpdo is extended for the cross-order set-up optimization and provision of manufacturing re-sources especially for single and small series production with connection to purchase and physical portfolio management. 2006 The EXAPT systems are available for extended use as an information platform for production, the time management, and similar requirements. EXAPTsolid is extended for the feature-oriented milling operation and machine simulation. The NC programming of complex machine tools, e.g. three-turret-turning/milling centers is supported by EXAPT systems, as well as the use of multi-functional tools. 2007 A module for 3-5-axis simultaneous milling machining is presented.
U-matrix
The U-matrix (unified distance matrix) is a representation of a self-organizing map (SOM) where the Euclidean distance between the codebook vectors of neighboring neurons is depicted in a grayscale image. This image is used to visualize the data in a high-dimensional space using a 2D image. == Construction procedure == Once the SOM is trained using the input data, the final map is not expected to have any twists. If the map is twist-free, the distance between the codebook vectors of neighboring neurons gives an approximation of the distance between different parts of the underlying data. When such distances are depicted in a grayscale image, light colors depict closely spaced node codebook vectors and darker colors indicate more widely separated node codebook vectors. Thus, groups of light colors can be considered as clusters, and the dark parts as the boundaries between the clusters. This representation can help to visualize the clusters in the high-dimensional spaces, or to automatically recognize them using relatively simple image processing techniques.